收录原始数据:
gwas catelog
大项目(各个国家的biobank):
finngen:https://www.finngen.fi/en/access_results
ubk
deCODE
综合类:
ieugwas:https://gwas.mrcieu.ac.uk/
pan-ukb:https://pan.ukbb.broadinstitute.org/
其他:
https://www.globalbiobankmeta.org/parcipating-biobanks
这个综合了很多biobank,序列方面的研究不愧是目前最快的
散落的(目前套路用的比较多的):
cytokines:https://data.bris.ac.uk/data/dataset/3g3i5smgghp0s2uvm1doflkx9x
731immune cells:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8517961/
412microbiome:Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project
91cytokines:Genetics of circulating inflammatory proteins identifies drivers of immune-mediated disease risk and therapeutic targets
1400metabolome:Genomic atlas of the plasma metabolome prioritizes metabolites implicated in human diseases
需要申请:
INTERVAL study
Mapping the proteo-genomic convergence of human diseases
其他文章:
https://zhuanlan.zhihu.com/p/467150143
VCF to GWSA:
https://www.jianshu.com/p/3827e61816fb
https://mrcieu.github.io/gwasvcf/
https://tomerantman.github.io/VCFtoGWAS/、https://tomerantman.github.io/VCFtoGWAS/articles/2)%20Chapter%201.html
https://mp.weixin.qq.com/s/r1wtcSHbTrOt8O-UxvFdRA