GSVIVT01000001001 pacid=17816625 transcript=GSVIVT01000001001 locus=GSVIVG01000001001 ID=GSVIVT01000001001.Genoscope12X annot-version=Genoscope.12X
变为
GSVIVT01000001001
##splitname.py for python2
#!/usr/lib/python
#-*- coding:utf-8 --*-
import sys, os
def splitname(infile, outfile):
ini = open(infile, 'r')
out = open(outfile, 'w')
for line in ini:
if line[0]=='>':
lineL=line.split(' ')
print >>out, lineL[0]
else:
print >>out, line.strip()
if __name__=="__main__":
infile = sys.argv[1]
outfile = sys.argv[2]
splitname(infile, outfile)
