240 发简信
IP属地:广东
  • 大神,我想问一个问题,我想跑一下流程,但是seurat data这个内置数据集无法下载,尝试过Github下载,和本地下载,都无法下载下来。这个内置数据集如何下载??谢谢
    错误提示
    > devtools::install_github('satijalab/seurat-data')
    Downloading GitHub repo satijalab/seurat-data@master
    Error in utils::download.file(url, path, method = method, quiet = quiet, :
    cannot open URL 'https://api.github.com/repos/satijalab/seurat-data/tarball/master'
    本地错误提示
    ERROR: loading failed for 'i386', 'x64'
    * removing 'C:/Users/Aby/Documents/R/win-library/3.6/SeuratData'
    Error: Failed to install 'satijalab-seurat-data-56a538f.tar.gz' from local:
    (converted from warning) installation of package ‘C:/Users/Aby/AppData/Local/Temp/Rtmp6NkS64/file26545f4948f9/SeuratData_0.1.0.tar.gz’ had non-zero exit status

    「热图」ComplexHeatmap展示单细胞聚类

    实用Seurat自带的热图函数DoHeatmap绘制的热图,感觉有点不上档次,于是我尝试使用ComplexHeatmap这个R包来对结果进行展示。 个人觉得好的热图有三个要素...

  • 大神,我想问一个问题,我想跑一下流程,但是seurat data这个内置数据集无法下载,尝试过官网下载,和本地下载,都无法下载下来。这要如何处理??谢谢
    官网提示
    > devtools::install_github('satijalab/seurat-data')
    Downloading GitHub repo satijalab/seurat-data@master
    Error in utils::download.file(url, path, method = method, quiet = quiet, :
    cannot open URL 'https://api.github.com/repos/satijalab/seurat-data/tarball/master'
    本地错误提示
    ERROR: loading failed for 'i386', 'x64'
    * removing 'C:/Users/Aby/Documents/R/win-library/3.6/SeuratData'
    Error: Failed to install 'satijalab-seurat-data-56a538f.tar.gz' from local:
    (converted from warning) installation of package ‘C:/Users/Aby/AppData/Local/Temp/Rtmp6NkS64/file26545f4948f9/SeuratData_0.1.0.tar.gz’ had non-zero exit status

    单细胞转录组数据分析||Seurat新版教程: Integration and Label Transfer

    前情回顾: sc-RAN-seq 数据分析||Seurat新版教程:Guided Clustering Tutorial sc-RAN-seq 数据分析||Seurat新版教...